# Last edited on 2013-10-14 19:23:23 by stolfilocal

PROG := dm_analyse_cdv
PROGDIR := ../..

include ${STOLFIHOME}/programs/c/GENERIC-PROGS-TEST.make

TESTS := \
  match:DSIM:DYAK:LASTZ:256:85
  
MORE_TESTS := \
  match:EDH1:E933:LASTZ:256:85
  
all: 
	for tt in ${TESTS} ; do \
          ${MAKE} TEST=$$tt single ; \
        done

######################################################################
# For ${TEST}
ifneq "/${TEST}" "/"

TEST_ARGS := ${subst :, ,${TEST}}
SUBDIR      := ${word 1,${TEST_ARGS}}
SEQ_A       := ${word 2,${TEST_ARGS}}
SEQ_B       := ${word 3,${TEST_ARGS}}
TOOL        := ${word 4,${TEST_ARGS}}
MIN_RUNGS   := ${word 5,${TEST_ARGS}}
MIN_GOOD    := ${word 6,${TEST_ARGS}}

DATA_DIR := ${STOLFIHOME}/programs/c/DNA/DATA
OUT_DIR := out

SEQ_A_FILE := ${DATA_DIR}/${SUBDIR}/bas/${SEQ_A}.bas
SEQ_B_FILE := ${DATA_DIR}/${SUBDIR}/bas/${SEQ_B}.bas
CANDS_FILE := ${DATA_DIR}/match/cdv/${SEQ_A}_${SEQ_B}_${TOOL}_${MIN_RUNGS}_${MIN_GOOD}.cdv

OUT_PREFIX := ${OUT_DIR}/${SEQ_A}_${SEQ_B}_${TOOL}_${MIN_RUNGS}_${MIN_GOOD}

MAX_CANDS := 0
MAX_STEP := 60

single: clean run

run: ${OUT_DIR} ${PROGDIR}/${PROG} ${CANDS_FILE}
	${PROGDIR}/${PROG} \
            -seqA ${SEQ_A} ${SEQ_A_FILE} \
            -seqB ${SEQ_B} ${SEQ_B_FILE} \
            -maxCands ${MAX_CANDS} \
            -maxStep ${MAX_STEP} \
            -outPrefix ${OUT_PREFIX} \
          < ${CANDS_FILE}
	${PROGDIR}/dm_plot_rungs.sh ${OUT_PREFIX}-rungs.eps ${OUT_PREFIX}-rungs.dat
	gv ${OUT_PREFIX}-rungs.eps
	${PROGDIR}/dm_plot_events.sh rungs EQL ${OUT_PREFIX}-evts.eps ${OUT_PREFIX}-evts.dat
	gv ${OUT_PREFIX}-evts.eps

${OUT_DIR}:
	mkdir -p ${OUT_DIR} 

clean:: 
	-/bin/rm -fv ${OUT_PREFIX}*.dat ${OUT_PREFIX}*.txt ${OUT_PREFIX}*.eps

endif
# end ${TEST}
######################################################################